Dataset: Varshney

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White_A White_L4 White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 GleesonModel OlivaresModel

Dataset taken from Varshney et al. 2011. Data extracted from NeuronConnectFormatted.xlsx for neuronal connectivity. Python Reader: VarshneyDataReader

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Graph - Matrix - Hive plot - Symmetry

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Raw Data - Neurons - Pharynx - Social Network - Escape Response Circuit - Cook 2019 Fig 3 - Locomotion 1 - Locomotion 2 - Locomotion 3 - Peptidergic Hubs - Nonpharyngeal Neurons (herm) - Sensory Neurons (somatic) - Motor Neurons (somatic) - Interneurons (somatic) -

Peptidergic hubs as outlined in in Ripoll-Sánchez et al. 2023, Fig 7E

Chemical Exc

No plottable connections of this type...

Electrical

No plottable connections of this type...

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Peptidergic Hubs (PeptidergicHubs)

Peptidergic hubs as outlined in in Ripoll-Sánchez et al. 2023, Fig 7E

Connection type	Total size	Values present	Nodes with pre connections	Nodes with post connections
Chemical Exc	(4, 4) matrix	14 non-zero entries, avg. weight: 360.2142857142857, sum: 5043.0	Hubs, Motor core, Periphery, Sensory core	Hubs, Motor core, Periphery, Sensory core
Electrical	(4, 4) matrix	14 non-zero entries, avg. weight: 126.92857142857143, sum: 1777.0	Hubs, Motor core, Periphery, Sensory core	Hubs, Motor core, Periphery, Sensory core

Nodes in current view (4 total)	Num cells in node (302 total)	Num in this dataset (279 total)	Cells
Periphery	147	133	ADAL, ADAR, ADEL, ADER, ADLL, ADLR, AFDL, AFDR, AIAL, AIAR, AINL, AINR, ALNL, ALNR, ASEL, ASER, ASHL, ASHR, ASIL, ASIR, ASJL, ASJR, AUAL, AUAR, AVG, AVHL, AVHR, AVJL, AVJR, AVL, AWBL, AWBR, AWCL, AWCR, BAGL, BAGR, CEPDL, CEPDR, CEPVL, CEPVR, DD1, DD2, DD3, DD4, DD5, DD6, DVB, DVC, FLPL, FLPR, I2L, I2R, I6, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2DL, IL2DR, IL2L, IL2R, IL2VL, IL2VR, LUAL, LUAR, M2L, M2R, M3L, M3R, M4, MCL, MCR, MI, NSML, NSMR, OLLL, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, PDEL, PDER, PHAL, PHAR, PHBL, PHBR, PHCL, PHCR, PLNL, PLNR, RIFL, RIFR, RIPL, RIPR, RIS, RIVL, RIVR, RMEL, RMER, RMGL, RMGR, SAADL, SAADR, SAAVL, SAAVR, SIADL, SIADR, SIAVL, SIAVR, SIBDL, SIBDR, SIBVL, SIBVR, SMBDL, SMBDR, SMBVL, SMBVR, URADL, URADR, URAVL, URAVR, URYDL, URYDR, URYVL, URYVR, VC1, VC2, VC3, VC4, VC5, VC6, VD1, VD10, VD11, VD12, VD13, VD2, VD3, VD4, VD5, VD6, VD7, VD8, VD9
Motor core	48	46	AS10, AS11, AS3, AS4, AS5, AS6, AS7, AS8, AS9, CANL, CANR, DA5, DA6, DA7, DA8, DA9, DB3, DB4, DB5, DB6, DB7, PDA, PDB, PLML, PLMR, PQR, PVDL, PVDR, PVM, PVWL, PVWR, VA10, VA11, VA12, VA5, VA6, VA7, VA8, VA9, VB10, VB11, VB3, VB4, VB5, VB6, VB7, VB8, VB9
Sensory core	55	48	ADFL, ADFR, AIBL, AIBR, AIML, AIMR, AIYL, AIYR, AIZL, AIZR, ALML, ALMR, AQR, ASGL, ASGR, ASKL, ASKR, AWAL, AWAR, I1L, I1R, I3, I4, I5, M1, M5, RIAL, RIAR, RIBL, RIBR, RICL, RICR, RIGL, RIGR, RIH, RIML, RIMR, RIR, RMDDL, RMDDR, RMDL, RMDR, RMDVL, RMDVR, RMFL, RMFR, RMHL, RMHR, SABD, SABVL, SABVR, URBL, URBR, URXL, URXR
Hubs	52	52	ALA, AS1, AS2, AVAL, AVAR, AVBL, AVBR, AVDL, AVDR, AVEL, AVER, AVFL, AVFR, AVKL, AVKR, AVM, BDUL, BDUR, DA1, DA2, DA3, DA4, DB1, DB2, DVA, HSNL, HSNR, PVCL, PVCR, PVNL, PVNR, PVPL, PVPR, PVQL, PVQR, PVR, PVT, RID, RMED, RMEV, SDQL, SDQR, SMDDL, SMDDR, SMDVL, SMDVR, VA1, VA2, VA3, VA4, VB1, VB2

Neurons (herm) (279)

Full list of Neurons (hermaphrodite only) in this dataset

Missing neurons (23)

Full list of Missing neurons (known hermaphrodite neurons not present)

CANL | CANR | I1L | I1R | I2L | I2R | I3 | I4 | I5 | I6 | M1 | M2L | M2R | M3L | M3R | M4 | M5 | MCL | MCR | MI | NSML | NSMR | VC6

Dataset: Varshney

Neurons (herm) (279)

Missing neurons (23)

Muscles (0)

Other cells (0)